If you use this resource, please cite: Waldherr A., Freimann G.L., MONDE⋅T: A Database and Interactive Webserver for Non-Canonical Amino Acids (ncAAs) in the PDB. Online. BioXriv. (2025) mondet.tuebingen.mpg.de
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wwPDB Berman H., Henrick K., Nakamura, H. Announcing the worldwide Protein Data Bank. Nature Structural Biology. (2003) 10.1038/nsb1203-980. Specifically, the Chemical Component Dictionary (per May 2025): www.wwpdb.org/data/ccd
RCSB PDB Berman H.M., Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H., Shindyalov I.N., Bourne P.E. The Protein Data Bank. Nucleic Acids Research. (2000) 10.1093/nar/28.1.235. Specifically, the Search API and the Data API
3D Visualization Sehnal D., Bittrich S., Deshpande M., Svobodová R., Berka K., Bazgier V., Velankar S., Burley S.K., Koča J., Rose A.S. Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures. Nucleic Acids Research. (2021) 10.1093/nar/gkab31
Mol* dash Haoran Sun Dash-molstar is a Dash component library that integrate Molstar Viewer into Dash framework. GitHub repository
Chemical structures Landrum G. RDKit: Open-source cheminformatics RDKit